Insertion junction: CLIP2.011486_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011486
Chromosome:chromosome 11
Location:485972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467592 Probable amino acid/metabolite permease; (1 of 1) PTHR11785//PTHR11785:SF228 - AMINO ACID TRANSPORTER // GABA-SPECIFIC PERMEASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCCAAAGGCATTGGCGGGCGTGAGGTCACGCCGCAGACCCGCCGTC
Internal bar code:TGAGTAACGCTTCACCACCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2601
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTCTACGTGGGTTGCAT
Suggested primer 2:AGGTGTGTGTGTGTGTGTGT