Insertion junction: CLIP2.011496_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011496
Chromosome:chromosome 8
Location:4188461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383750 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAACACATGCCTGCCAGCTGCCAGATAGAACAACTCACCTGCTCCTTGA
Internal bar code:TTTGGGGGATTGGTGAGGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:798
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGCCCGGTTGGTCAAAG
Suggested primer 2:GCTGCTGTCAAAACATGCCA