Insertion junction: CLIP2.011501_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011501
Chromosome:chromosome 4
Location:2926741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224600 (1 of 1) IPR000253//IPR011598 - Forkhead-associated (FHA) domain // Myc-type, basic helix-loop-helix (bHLH) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCCAACGCACCCGCCATGGCGCCGCCAGCGCTTGGCGCCGCCGGCG
Internal bar code:TCGAGTCGTTTCACGTCCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2142
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTCAGGTGCATGGATTC
Suggested primer 2:CTCACACCCTCACACCCATC