Insertion junction: CLIP2.011503_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011503
Chromosome:chromosome 8
Location:47195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358200 ACV4 protein kinase; (1 of 6) PTHR23257//PTHR23257:SF529 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGCGCGGAACACCTCAGGGGCCTGTCAGGGGGGTTATATGGGGCGAG
Internal bar code:TGGCATTATTACATGACCCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTCACTGCCGAAGTTCA
Suggested primer 2:CTCGTACATCATCACGCCGA