Insertion junction: CLIP2.011508_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011508
Chromosome:chromosome 16
Location:4903874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686850 PTA4 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain; Proton/phosphate symporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGTCCGAAAGCTTGATGGGGCAGCCGATGCCCTTCCAGCAGTTCTTG
Internal bar code:AATGGTGAGGAGAGATTCTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1480
LEAP-Seq percent confirming:98.7805
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCCATAACCCAGCAAGT
Suggested primer 2:GACAGGCACAACGCAAATGT