Insertion junction: CLIP2.011511_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011511
Chromosome:chromosome 12
Location:2184542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509250 EYE2 Eyespot assembly protein 2; (1 of 1) PTHR18929//PTHR18929:SF99 - PROTEIN DISULFIDE ISOMERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCGGGTGGTCATGTGGGCGTGGTAGCTTGGTGCCTGTAAGGGATGG
Internal bar code:CTTATTTTTTTAGTTCTCCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:838
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCACGGTAACTCCTGT
Suggested primer 2:GGGGTGAGTTTCTGGCATCA