Insertion junction: CLIP2.011512_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011512
Chromosome:chromosome 9
Location:3986488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801040 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGCCAGTGGGAGGTGGAATGGCAGGTCCGCCTGCAGGCCATGCAGC
Internal bar code:GGTTACCCAAACTTTTCAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3336
LEAP-Seq percent confirming:1.88679
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAAAGTGCCAGACCCCA
Suggested primer 2:ACCGACTTGTGAGTAGTGCG