Insertion junction: CLIP2.011516_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011516
Chromosome:chromosome 16
Location:4657696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667451 TLP3,CAV6 Tubby-like protein; (1 of 5) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGAATGTACCCCCCACACACACACACATACGCACACAGCGAATCTG
Internal bar code:ATTTCTATTTTTGTCCGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4354
LEAP-Seq percent confirming:6.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGCGTCTCGATCCAGTG
Suggested primer 2:ACCTTTCCCAAACCCTGCAA