Insertion junction: CLIP2.011523_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011523
Chromosome:chromosome 3
Location:6222561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191500 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTGCGTGTGAGGAGAGAGAGAGAGAGTGTGTGTGTGTGCGTGCGCGT
Internal bar code:CTCCCCGTGTTGGGTTTAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:453
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCACGCCCCTCTTCCAT
Suggested primer 2:CATTACCATCGCTTGCACCG