Insertion junction: CLIP2.011532_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011532
Chromosome:chromosome 4
Location:1618746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213000 MAE12 (1 of 5) PTHR11206:SF94 - DNA-DAMAGE-INDUCIBLE PROTEIN F; MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGTCAGAATAATAATAGGATGTCAGCACTTGACATGCTTGCGGCTGC
Internal bar code:GTCTCAATCTGGGCCGGTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TACACTTCCGGCGATCGATG
Suggested primer 2:GAGCGCTTTAACACTCCCCT