Insertion junction: CLIP2.011535_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011535
Chromosome:chromosome 3
Location:7469571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCGTATCGCAAACACGACGGATACTAAGCACACCCGCAGGCCGCGCA
Internal bar code:TCTCATGTACTCATCTTTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3916
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTCCCTCATTCCTGC
Suggested primer 2:GCACGCTTTCTTCGATCCAC