Insertion junction: CLIP2.011547_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011547
Chromosome:chromosome 2
Location:5080054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111300 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCAGAGCCTAGGCGAAGCCAGCCATTCGCCGGAGCCTCACGGCCCTCG
Internal bar code:GCGTCCTGGGCATGTAGAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:6205
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGGTCTACCTGTACTGA
Suggested primer 2:TGTCTAGGTCAAGATCGCGC