Insertion junction: CLIP2.011555_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011555
Chromosome:chromosome 12
Location:3155895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500450 TPD1 (1 of 2) PTHR12121:SF37 - 2',5'-PHOSPHODIESTERASE 12; 2'%252C5'-phosphodiesterase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGAGAGCAAAGACAGCTCCCTGAATTGACACATAATCTGCATGGGCG
Internal bar code:TATGGAGTGTAACCCGTGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3028
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTAGAACACGTCCACCA
Suggested primer 2:TGGGCTCAGGAAATGCAGAG