Insertion junction: CLIP2.011557_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011557
Chromosome:chromosome 16
Location:7033339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g802001 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGATTTGGTCCCCGCCCCAACCTGCTGATGCAACCGCCATGACCAGTG
Internal bar code:CTGATGAATGGCTTGTTAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3776
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCAGCCACCACTAATCA
Suggested primer 2:GTCGGGAGGGTAGAGTGAGT