Insertion junction: CLIP2.011559_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011559
Chromosome:chromosome 10
Location:5759846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459900 PFH4,PHX16,P4H4 Prolyl 4-hydroxylase 4; (1 of 5) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGGACCGGCGCTGCGTACACCCCGTGCAGTAATGCACATGGCGGAT
Internal bar code:GATTGATTTCCCGTTCCGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1691
LEAP-Seq percent confirming:60.4651
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTCCTTGCTTGTTGGTG
Suggested primer 2:CACCGTTGTCAAAGCACAGG