Insertion junction: CLIP2.011561_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011561
Chromosome:chromosome 17
Location:740188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701000 (1 of 1) PTHR35518//PTHR35518:SF2 - FAMILY NOT NAMED // MAINTENANCE OF TELOMERE CAPPING PROTEIN 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGCAGCGCTTGGGCGGGTCTCGTTTCCTGTGCGCTGTCTGACGCACG
Internal bar code:TCATTGTCGTCAGTCCCCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1218
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTTGCCTGTGATGTGC
Suggested primer 2:AGCAGGACTCTCCACTCACT