Insertion junction: CLIP2.011563_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011563
Chromosome:chromosome 12
Location:7563335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556100 DNAAF13,SPAG1 Sperm-associated antigen 1; (1 of 1) PF00515//PF07719//PF13414//PF13877 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) // Potential Monad-binding region of RPAP3 (RPAP3_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCACCCACTTGCCCAGCTGCAGCCGCGCCGCGGCGCGGCGGACGTA
Internal bar code:GTGGTGTCGCACATGGCGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2838
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGGTAGTGCGTCCTAT
Suggested primer 2:GCCTCACCGGTTGATGTACA