Insertion junction: CLIP2.011582_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011582
Chromosome:chromosome 13
Location:877132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567500 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCAGCCGCGTTGGCGGCAGCCCAGATATGTACGCACGCGTGGCGGGC
Internal bar code:GTGTTCCTACGAACGGTCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTGACGTCAGTGTCTG
Suggested primer 2:ATCGGGCGTCATTGTCTCTC