Insertion junction: CLIP2.011582_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011582
Chromosome:chromosome 13
Location:877137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567500 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCCCAGCGCCGCCGCCGGCGCGTCGGCCGTGACGGGCAGGCTGGA
Internal bar code:GTGTTCCTACGAACGGTCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2537
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGGGCGTCATTGTCTCTC
Suggested primer 2:AAGGCTGACGTCAGTGTCTG