Insertion junction: CLIP2.011590_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011590
Chromosome:chromosome 2
Location:3481600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099050 SRR30 (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain; Scavenger receptor cysteine-rich protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCCCAAAGCGCTTGCTGCCCTTCTTGTACCTGTGCGGAGTGGGCGG
Internal bar code:TCGCATTATCCTTGTGGAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2536
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGCACATGTGAGTTGCT
Suggested primer 2:TGATATGCGACAGCTCCGTC