Insertion junction: CLIP2.011593_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011593
Chromosome:chromosome 13
Location:2905642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583400 OPR57 OctotricoPeptide Repeat protein 57; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACGCAGCCACCTCGGCCACTGCTGCTGCTGCTGCCCTCGAGGGTGCG
Internal bar code:TTTGTCGTATTATAATGGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1913
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGCAGTAGGGACATTCC
Suggested primer 2:TAGGCAGCTCTTGTTGTCCG