Insertion junction: CLIP2.011596_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011596
Chromosome:chromosome 12
Location:2548454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506900 (1 of 1) PTHR21568:SF0 - TRNA PSEUDOURIDINE SYNTHASE PUS10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACGTTCCCTCCCCATGTACTGTTATTTCCCTGCGTTTCCAGCACC
Internal bar code:TGTCACTAAGATATTGCCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1715
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGTAGCGACACGTGTT
Suggested primer 2:TCGCTTACAGGCTTGCTTCA