Insertion junction: CLIP2.011600_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011600
Chromosome:chromosome 1
Location:2714455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016450 (1 of 1) IPR000104//IPR001214//IPR002893 - Antifreeze protein, type I // SET domain // Zinc finger, MYND-type; SET domain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTGTGCGGTGCACGCAGGTGTGGGTGAGGGGGAAGGGATAGTTCATT
Internal bar code:AGCCATAGAGCGGACACATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGACACCAGCCCAAACCAAA
Suggested primer 2:TACGACAGAGCCACAGAGGA