Insertion junction: CLIP2.011602_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011602
Chromosome:chromosome 6
Location:5565946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287150 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGGCCGGGGTTGCCGATGCTGGTGGCGCTGGTGCCCCCACACCAGCT
Internal bar code:TACTATGCGACTGGTCTCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2941
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TATATGCTGCACTCGGGCTG
Suggested primer 2:CTGCACGTCTGACACTGGAT