Insertion junction: CLIP2.011617_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011617
Chromosome:chromosome 10
Location:1101334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425300 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGCGCGCTTGATGGGTTACCCGTACCCTTGACCGTGATCGTGCTAGA
Internal bar code:CAGACGATAATGCCTATACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3727
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTGTCACCATTGTTGCT
Suggested primer 2:CATCGGCCTTGACATTGCTG