Insertion junction: CLIP2.011622_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011622
Chromosome:chromosome 3
Location:2660589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160700 (1 of 2) IPR000679//IPR013088 - Zinc finger, GATA-type // Zinc finger, NHR/GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAACCTGCCGCGTGGTCCCCACCCCTGTTCCTTCCTTTATCCCTGGCT
Internal bar code:TGCGCCGAGGTCGTGTATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCCGGAAATCTTCTTGCT
Suggested primer 2:CCAGCGCCATTTCCACAAAA