Insertion junction: CLIP2.011622_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011622
Chromosome:chromosome 3
Location:2660590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160700 (1 of 2) IPR000679//IPR013088 - Zinc finger, GATA-type // Zinc finger, NHR/GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCGTTCTCGCTTCGGCTGCAGCACAATCGCAGACGCCAGTGCACTCG
Internal bar code:TGCGCCGAGGTCGTGTATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2442
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCGCCATTTCCACAAAA
Suggested primer 2:TCGCCGGAAATCTTCTTGCT