Insertion junction: CLIP2.011624_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011624
Chromosome:chromosome 6
Location:1751101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262977 (1 of 2) PTHR14187//PTHR14187:SF5 - ALPHA KINASE/ELONGATION FACTOR 2 KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGTCCTCCCACCTGCCGCAGAGGCAGCAGCAGCGAAACAAACCCAT
Internal bar code:CCTAGAAGTCCCTAGGGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1124
LEAP-Seq percent confirming:45.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGTGCAGCAGACTGTA
Suggested primer 2:GGCCTTGAGGACACGGTAAA