Insertion junction: CLIP2.011629_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011629
Chromosome:chromosome 13
Location:2631307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581050 GT90F46,GT90-46 (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase; GT90 family protein 46 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCAGCTGGTGAACATAGCGTCAGCAACGGGAGGCAAAAGCGCTGCCC
Internal bar code:TGATAGGCGCCGATGCTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2735
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTGAGGTCGTGTTCCAA
Suggested primer 2:GTTCGTTTTCTTGTGGGCCC