Insertion junction: CLIP2.011635_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011635
Chromosome:chromosome 2
Location:8281591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g143350 PDE6 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTGAGCACACGCGGGCGCCGTGCCGCCTCGCACCTCGTCGATGACG
Internal bar code:GCGGGCAAATGGCGGTACTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2058
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCAGCTTCGCATTCACG
Suggested primer 2:AGTGCTGAGACACAGGCATC