Insertion junction: CLIP2.011644_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011644
Chromosome:chromosome 7
Location:1801609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325727 (1 of 3) PTHR10566:SF76 - PROTEIN Y32H12A.7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGGCAAGAGTGCAGGGATGAGGGCTGAAAGACCTGCGTGTGCCTCG
Internal bar code:AATCGCGTATGTTGACGATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1330
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTGAGTTGCTGTTGGTG
Suggested primer 2:AACGCGAGGTGTCATCTGTT