Insertion junction: CLIP2.011651_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011651
Chromosome:chromosome 3
Location:1116056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148750 CLH1 Chlorophyllase I; (1 of 1) PTHR33428:SF2 - CHLOROPHYLLASE-1 outside_mRNA
Cre03.g148800 (1 of 1) 2.1.1.4 - Acetylserotonin O-methyltransferase / Hydroxyindole O-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGCGGTGCACTAGCCAACAGATAGGCTCGCGCAGCGTCAGTTAGGGC
Internal bar code:GAACCTTGGGCAGGTAGTAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGCTGGGATACGTAAT
Suggested primer 2:GTTTGCACTGCTGGGTGAAG