Insertion junction: CLIP2.011652_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011652
Chromosome:chromosome 10
Location:719860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422400 (1 of 89) 3.6.4.13 - RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACACGGGTGTGACGCGGGTGCAGTGCAAGGTGGCGTGAAGGACGGG
Internal bar code:TCTAGGCGGCTGTGGTCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:345
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAGCTTGAAACGGCATG
Suggested primer 2:GGCTTGCTAACACCTACCGT