Insertion junction: CLIP2.011654_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011654
Chromosome:chromosome 10
Location:5335032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456800 (1 of 2) PF09733 - VEFS-Box of polycomb protein (VEFS-Box) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGTATGGAGCGCCTGGTCTTATCAAGTTGTGACCAGGATATTGCAGC
Internal bar code:CGGGATCGGCAGACAACACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATATGCCGGTCAAACGC
Suggested primer 2:TGAGATGGAGGTGGAGGGAG