Insertion junction: CLIP2.011667_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011667
Chromosome:chromosome 4
Location:2104119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219700 BBS9 (1 of 1) K19398 - Bardet-Biedl syndrome 9 protein (BBS9); Bardet-Biedl syndrome-9 associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGACTTTATCTACCACCTCAAATAACCTATCATTATCACCAGCCCC
Internal bar code:GTTAGGTCCAAGGACCACCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTGTGTCCAGTCGTAC
Suggested primer 2:GAGGGGAGGAGTTCTTTGCC