Insertion junction: CLIP2.011675_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011675
Chromosome:chromosome 3
Location:4559303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176300 (1 of 1) IPR027420 - DNA polymerase beta, N-terminal domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTCTCAGCTGTTCGAGGCGACCCTGGGGCACCTGATCGCATCAGGTG
Internal bar code:CACTATAGCCGTATGGGTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1137
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGAGGGTGCAGAAGAGT
Suggested primer 2:GCTCCCCCAAAGATTGCCTA