Insertion junction: CLIP2.011686_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011686
Chromosome:chromosome 6
Location:3682528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278151 (1 of 1) K10880 - DNA-repair protein XRCC3 (XRCC3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGAGTTGTTACAAGGGGCATGAGCGTTTGGGAGCACTGTTCACCGG
Internal bar code:TATAATAAATAACACGCCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1302
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCCTCGATTCTAACTCG
Suggested primer 2:GCTCTTCTCCAACATGCCCT