Insertion junction: CLIP2.011690_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011690
Chromosome:chromosome 16
Location:5280514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684000 (1 of 1) PTHR23153//PTHR23153:SF36 - UBX-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGATCACCCTTACTCACCGGCCTCAGACGCCTTGGTGCCAGGCGCCT
Internal bar code:TTGTCATTACACGCGCTCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACACCCGGAGTTTTGAC
Suggested primer 2:AAAGGGACGGTAACCAGCAG