Insertion junction: CLIP2.011721_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011721
Chromosome:chromosome 4
Location:4077991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g233302 (1 of 2) PTHR23132//PTHR23132:SF9 - D-ALANINE--D-ALANINE LIGASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTGTATGTGCACACAGCCGGAGGCGTACGACCCGCATGGGCGCTAC
Internal bar code:GCTTCTAGGCAATTTGGGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCGGTTGCTTCTTTGG
Suggested primer 2:CTATCACGGCGCCCAAGTAT