Insertion junction: CLIP2.011725_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011725
Chromosome:chromosome 16
Location:1488659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652900 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGGCCGCCGCCGGGCCCGCCAGGTGCGGCTGGCCGCGGCGTGGCC
Internal bar code:TGTTAACACCTAGATGCTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2881
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGATGCCTGTTACCGTGT
Suggested primer 2:GTAGCTGATCTCGCCGTACC