Insertion junction: CLIP2.011725_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011725
Chromosome:chromosome 16
Location:1488662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652900 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCTCCGGGGTGAGTACTGGCGTGTGTGTGTATGTGTGTGTACGTGTG
Internal bar code:TGGATATCGTGTCTTACCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCTGATCTCGCCGTACC
Suggested primer 2:CTGGATGCCTGTTACCGTGT