Insertion junction: CLIP2.011729_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011729
Chromosome:chromosome 13
Location:967395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568200 AXL1 Arabinose chain extension enzyme like protein 1; (1 of 3) PTHR10994//PTHR10994:SF69 - RETICULON // PROLINE-RICH PROTEIN 18 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCCTACACGCCTACACGCACACGCCTACACACACGCACACGGCTGC
Internal bar code:GTTTATGGGTCAACTTTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1171
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGCTGCACCCACACTTC
Suggested primer 2:GCAGAGGCTGTACGAGGTAC