Insertion junction: CLIP2.011731_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011731
Chromosome:chromosome 3
Location:8085324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201150 (1 of 2) 2.5.1.117 - Homogentisate solanesyltransferase / HST intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACATCGACATGCACGTCGCTCGAAGCCGGGGGCATCCCTATAAATACC
Internal bar code:CGTAGCTGCGCGTAGGTAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:82
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGACTCAGCACCGTAC
Suggested primer 2:CAGGTCATGAATGGCAGGGT