Insertion junction: CLIP2.011741_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011741
Chromosome:chromosome 3
Location:3754219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169300 (1 of 2) K05681 - ATP-binding cassette, subfamily G (WHITE), member 2 (ABCG2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTGCGGGAGGCTCTGGAGTTCGCGGCCGCACTCAAGCTGCCGTCCTC
Internal bar code:AGCCAGATTGAGCAAGGCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:557
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTGTCGCTAAGTGGTT
Suggested primer 2:CCCTGTGACTGTTCGAAGCT