Insertion junction: CLIP2.011741_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011741
Chromosome:chromosome 3
Location:3754227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169300 (1 of 2) K05681 - ATP-binding cassette, subfamily G (WHITE), member 2 (ABCG2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTATAACGTCCTGTGCAACACCGTTTCGGCGGGCCACCAGGATGCGG
Internal bar code:TTTACTTCTTACGTCCGTACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:439
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGTGACTGTTCGAAGCT
Suggested primer 2:CGTCCTGTCGCTAAGTGGTT