Insertion junction: CLIP2.011747_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011747
Chromosome:chromosome 9
Location:2219346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395200 (1 of 1) PF04087 - Domain of unknown function (DUF389) (DUF389) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGCCCCCGACGACCCGTGACACCTGGGACCTACCGTACTCAATTGGG
Internal bar code:TTGTCGGCGTGACGCACCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGCATCCTCTCCCCTCA
Suggested primer 2:GACGCGTTATGTTGGCCATC