Insertion junction: CLIP2.011747_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011747
Chromosome:chromosome 9
Location:2219346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395200 (1 of 1) PF04087 - Domain of unknown function (DUF389) (DUF389) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCCGAGGGTCCAGCAGCCGGGTGCCAAACCCAGACCGATTCGGGTG
Internal bar code:TTGTCGGCGTGACGCACCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1282
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCGTTATGTTGGCCATC
Suggested primer 2:TCTTGCATCCTCTCCCCTCA