Insertion junction: CLIP2.011757_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011757
Chromosome:chromosome 12
Location:6991304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560800 (1 of 2) K14664 - IAA-amino acid hydrolase [EC:3.5.1.-] (ILR1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTCATTTTTGTGCCGGCTACACACAGAGGTTACGCGGCTTGAGAACT
Internal bar code:ACGTGGCGACTAATGCCGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1623
LEAP-Seq percent confirming:61.7647
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGACGGTAGCAGTGTTG
Suggested primer 2:TGTCTCACAGGCTGCTCAAG