Insertion junction: CLIP2.011769_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011769
Chromosome:chromosome 1
Location:3371705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021850 HEL2 (1 of 2) PTHR24031:SF249 - ATP-DEPENDENT DNA HELICASE RECG; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAACCCCTCCCCGTGTGTGTGAACCCCACACCCCCAGGCCGCCCACC
Internal bar code:GTTGGATCGCGTGCGTAGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCCAAAGTCGAAGATGT
Suggested primer 2:TGGAGGAGGAGGTTGGAGAG