Insertion junction: CLIP2.011777_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011777
Chromosome:chromosome 7
Location:6118953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355650 AMT1F,AMT6 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCGCTTGGCAGCCTGCTCCCCCTCTTGCTACACACTCCCCCAGTCC
Internal bar code:GTACTCTGATTGACCTCGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGGATAGGGGTTGGTG
Suggested primer 2:GACCTAGGTTGTATGGGCGG